1.

Conference Proceedings
Conference Proceedings
1. (151b) Stochastic Simulation of Cytosolic Calcium Dynamics
TaiJung Choi ; Mano R. Maurya ; Daniel M. Tartakovsky ; Shankar Subramaniam
Pub. info.: Conference proceedings : 2009 AIChE annual meeting, Nashvikke, TN, November 8-13 : 09 AIChE annual meeting, Nashville, TN ; Topical conferences.  pp.166886-,  2009.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-262
2.

Conference Proceedings
Conference Proceedings
2. 572u. Reconstruction of Phosphoproteins Signaling Network In Raw 264.7 Macrophages
Shakti Gupta ; Mano R. Maurya ; Shankar Subramaniam
Pub. info.: AIChE annual meeting, Philadelphia 100 : conference proceedings : 1908 to 2008 : 2008 AIChE annual meeting, Philadelphia, PA, November 16-21, 2008. Non-topical conferences.  pp.P133906-,  2008.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-255
3.

Conference Proceedings
Conference Proceedings
3. (228dr) Lipidomic and Transcriptomic Biomarkers for Diagnosis of Nonalcoholic Fatty Liver Diseases
Mano R. Maurya ; Eoin Fahy ; Shakti Gupta ; Jun Min ; Shankar Subramaniam
Pub. info.: Food, Pharmaceutical and Bioengineering Division 2016 : Core Programming Area at the 2016 AIChE Annual Meeting : San Francisco, California, USA, 13-18 November 2016.  pp.275-275,  2016.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2016
4.

Conference Proceedings
Conference Proceedings
4. (497h) Doubly Penalized Approach for Reconstructing Biological Networks
Behrang Asadi ; Mano R. Maurya ; Shankar Subramaniam ; Daniel M. Tartakovsky
Pub. info.: 2012 AIChE annual meeting, David L. Lawrence Convention Center, Pittsburgh, PA, October 28 - November 2, 2012 : Conference proceedings. Topical conferences.  2012.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-270
5.

Conference Proceedings
Conference Proceedings
5. (332g) Predicting Gene Expression Data from Changes in Eicosanoid Metabolite Levels in Raw 264.7 Macrophages Using Cybernetic Variables
Frank T. DeVilbiss ; Devaraj Jayachandran ; Mano R. Maurya ; Shakti Gupta ; Shankar Subramaniam
Pub. info.: Food, Pharmaceutical and Bioengineering Division 2014 : Core Programming Area at the 2014 AIChE Annual Meeting : Atlanta, Georgia, USA, 16-21 November 2014.  pp.397-397,  2014.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2014
6.

Conference Proceedings
Conference Proceedings
6. (601e) Causal Inference of Time-Varying Signaling Networks Using Dynamic Data
Maryam Masnadi-Shirazi ; Mano R. Maurya ; Shankar Subramaniam
Pub. info.: Food, Pharmaceutical and Bioengineering Division 2014 : Core Programming Area at the 2014 AIChE Annual Meeting : Atlanta, Georgia, USA, 16-21 November 2014.  pp.977-977,  2014.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2014
7.

Conference Proceedings
Conference Proceedings
7. (636d) Sensitivity Analysis of a Model of Calcium Dynamics Reveals Hot-Spots of Signaling
Mano R. Maurya ; Shankar Subramaniam
Pub. info.: Conference proceedings : 2009 AIChE annual meeting, Nashvikke, TN, November 8-13 : 09 AIChE annual meeting, Nashville, TN ; Non-topical conferences.  pp.166750-,  2009.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-262
8.

Conference Proceedings
Conference Proceedings
8. (55a) Modeling Gas--Solid Heat Transfer Using Particle-Resolved Direct Numerical Simulation
Bo Sun ; Sudheer Tenneti ; Shankar Subramaniam
Pub. info.: Particle Technology Forum 2013 : Core Programming Area at the 2013 AIChE Annual Meeting: Global Challenges for Engineering a Sustainable Future : San Francisco, California, USA, 3-8 November 2013.  pp.29-30,  2013.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2013
9.

Conference Proceedings
Conference Proceedings
9. (125a) Dynamics of a Homogeneous Bidisperse Gas-Solid Flow Using Particle-Resolved Direct Numerical Simulation
Mohammad Mehrabadi ; Sudheer Tenneti ; Shankar Subramaniam
Pub. info.: Particle Technology Forum 2013 : Core Programming Area at the 2013 AIChE Annual Meeting: Global Challenges for Engineering a Sustainable Future : San Francisco, California, USA, 3-8 November 2013.  pp.61-63,  2013.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2013
10.

Conference Proceedings
Conference Proceedings
10. (597b) F-Test in k-Fold Cross Validation and Its Application to the Discovery of Biological Networks
Mano R. Maurya ; Shakti Gupta ; Shankar Subramaniam
Pub. info.: 2010 AIChE annual meeting : conference proceedings : Salt Palace Convention Center, Salt Lake City, UT, November 7-12, 2010. Topical conferences.  2010.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-264
11.

Conference Proceedings
Conference Proceedings
11. (568o) Matrix and Optimization Approach to Kinetic Modeling of Lipid Pathways
Shakti Gupta ; Mano R. Maurya ; Shankar Subramaniam
Pub. info.: 2010 AIChE annual meeting : conference proceedings : Salt Palace Convention Center, Salt Lake City, UT, November 7-12, 2010. Non-topical conferences.  2010.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-264
12.

Conference Proceedings
Conference Proceedings
12. 468b. Comparison of Euler-Euler and Euler-Lagrange Simulations of Finite-Stokes-Numbers Gas-Particle Flows in a Lid-Driven Cavity
Rahul Garg ; Alberto Passalacqua ; Shankar Subramaniam ; R.O. Fox
Pub. info.: AIChE annual meeting, Philadelphia 100 : conference proceedings : 1908 to 2008 : 2008 AIChE annual meeting, Philadelphia, PA, November 16-21, 2008. Non-topical conferences.  pp.P129027-,  2008.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-255
13.

Conference Proceedings
Conference Proceedings
13. (332g) Predicting Gene Expression Data from Changes in Eicosanoid Metabolite Levels in Raw 264.7 Macrophages Using Cybernetic Variables
Frank T. Devilbiss ; Devaraj Jayachandran ; Mano R. Maurya ; Shakti Gupta ; Shankar Subramaniam
Pub. info.: Systems Biology 2014 : Topical Conference at the 2014 AIChE Annual Meeting : Atlanta, Georgia, USA, 16-21 November 2014.  pp.118-118,  2014.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2014
14.

Conference Proceedings
Conference Proceedings
14. (72h) Dynamic Modeling of Molecular Motor Association with Axonal Amyloid Precursor Protein Vesicles
Mano R. Maurya ; Lukasz Szpankowski ; Lawrence S.B. Goldstein ; Shankar Subramaniam
Pub. info.: Emerging Frontiers in Systems and Synthetic Biology 2015 : Topical Conference at the 2015 AIChE Annual Meeting : Salt Lake City, Utah, USA, 8-13 November 2015.  pp.9-9,  2015.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2015
15.

Conference Proceedings
Conference Proceedings
15. (72e) Prediction of Gene Expression Using Goal-Directed Metabolic Models
Frank T. DeVilbiss ; Mano R. Maurya ; Shakti Gupta ; Aravinda Mandli ; Shankar Subramaniam
Pub. info.: Emerging Frontiers in Systems and Synthetic Biology 2015 : Topical Conference at the 2015 AIChE Annual Meeting : Salt Lake City, Utah, USA, 8-13 November 2015.  pp.5-5,  2015.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2015
16.

Conference Proceedings
Conference Proceedings
16. 242g. Integrated Modeling of Lipids Metabolism and Signaling Pathways
Shakti Gupta ; Mano R. Maurya ; Andreia Maer ; Shankar Subramaniam
Pub. info.: 2007 AIChE annual meeting : Salt Palace Convention Center, Salt Lake City, Utah, November 4-9, 2007 : conference proceedings. Non-Topical Conference.  pp.P100065-,  2007.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-246
17.

Conference Proceedings
Conference Proceedings
17. (764b) Data-Driven Network Reconstruction of Biological Systems: Comparison of Statistical and Optimization-Based Methods
Behrang Asadi ; Mano R. Maurya ; Daniel M. Tartakovsky ; Shankar Subramaniam
Pub. info.: 2011 AIChE annual meeting, October 16-21, Minneapolis Convention Center, Minneapolis, MN : conference proceedings : Non-topical conferences.  2011.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-267
18.

Conference Proceedings
Conference Proceedings
18. (181c) Homogeneous Shear Simulations of Liquid-Solid Suspensions of Attractive Microparticles
Eric Murphy ; Gilson Lomboy ; Kejin Wang ; Sriram Sundararajan ; Shankar Subramaniam
Pub. info.: Particle Technology Forum 2014 : Core Programming Area at the 2014 AIChE Annual Meeting : Atlanta, Georgia, USA, 16-21 November 2014.  pp.145-145,  2014.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2014
19.

Conference Proceedings
Conference Proceedings
19. (72h) Dynamic Modeling of Molecular Motor Association with Axonal Amyloid Precursor Protein Vesicles
Mano R. Maurya ; Lukasz Szpankowski ; Lawrence S.B. Goldstein ; Shankar Subramaniam
Pub. info.: Food, Pharmaceutical and Bioengineering Division 2015 : Core Programming Area at the 2015 AIChE Meeting : Salt Lake City, Utah, USA, 8-13 November 2015.  pp.90-90,  2015.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2015
20.

Conference Proceedings
Conference Proceedings
20. (72e) Prediction of Gene Expression Using Goal-Directed Metabolic Models
Frank T. Devilbiss ; Mano R. Maurya ; Shakti Gupta ; Aravinda Mandli ; Shankar Subramaniam
Pub. info.: Food, Pharmaceutical and Bioengineering Division 2015 : Core Programming Area at the 2015 AIChE Meeting : Salt Lake City, Utah, USA, 8-13 November 2015.  pp.86-86,  2015.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2015
21.

Conference Proceedings
Conference Proceedings
21. (740g) Deductive Determination of Dynamic Cellular Objectives From Biological Data
Frank T. DeVilbiss ; Mano R. Maurya ; Shakti Gupta ; Shankar Subramaniam ; Doraiswami Ramkrishna
Pub. info.: Food, Pharmaceutical and Bioengineering Division 2016 : Core Programming Area at the 2016 AIChE Annual Meeting : San Francisco, California, USA, 13-18 November 2016.  pp.961-961,  2016.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2016
22.

Conference Proceedings
Conference Proceedings
22. (680a) DATA-Driven Reconstruction Of Biological Networks Using A Nonlinear MODEL Formulation
Behrang Asadi ; Mano R. Maurya ; Daniel M. Tartakovsky ; Shankar Subramaniam
Pub. info.: Systems Biology 2013 : Topical Conference at the 2013 AIChE Annual Meeting: Global Challenges for Engineering a Sustainable Future : San Francisco, California, USA, 3-8 November 2013.  pp.93-93,  2013.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2013
23.

Conference Proceedings
Conference Proceedings
23. (54e) A Constitutive Model for Intermediate, Quasi-Static and Inertial Regimes of Dense Granular Flow
Shankar Subramaniam ; V. Vidyapati
Pub. info.: 2012 AIChE annual meeting, David L. Lawrence Convention Center, Pittsburgh, PA, October 28 - November 2, 2012 : Conference proceedings. Non-topical conferences.  2012.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-270
24.

Conference Proceedings
Conference Proceedings
24. 4bl. Optimization as a Tool for Predictive Modeling of Biological Systems and Mining of Large-Scale Data Sets
Mano R. Maurya ; Shankar Subramaniam
Pub. info.: 2005 annual meeting & fall showcase : '05 AIChE, Oct 30 - Nov 4 : conference proceedings, Cincinnati Convention Center, Cincinnati, OH : non-topical presentation records : 04. Education.  2005.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-221(2)
25.

Conference Proceedings
Conference Proceedings
25. (693f) On the Incorporation of Direction and Magnitude in Statistical Correlation: Application to Gene-Microarray Data
Mano R. Maurya ; Shankar Subramaniam
Pub. info.: 2010 AIChE annual meeting : conference proceedings : Salt Palace Convention Center, Salt Lake City, UT, November 7-12, 2010. Non-topical conferences.  2010.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-264
26.

Conference Proceedings
Conference Proceedings
26. (243f) Stochastic Operator Splitting Method for Biological Systems
TaiJung Choi ; Mano R. Maurya ; Daniel M. Tartakovsky ; Shankar Subramaniam
Pub. info.: 2011 AIChE annual meeting, October 16-21, Minneapolis Convention Center, Minneapolis, MN : conference proceedings : Topical conferences.  2011.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-267
27.

Conference Proceedings
Conference Proceedings
27. 506g. Modeling of Heterotrimeric G-Protein Mediated Calcium Response in Raw 264.7 Macrophage Cells
Mano R. Maurya ; Shankar Subramaniam
Pub. info.: 2005 annual meeting & fall showcase : '05 AIChE, Oct 30 - Nov 4 : conference proceedings, Cincinnati Convention Center, Cincinnati, OH : non-topical presentation records : 15. Food, Pharmaceutical & Bioengineering Division.  2005.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-221(2)
28.

Conference Proceedings
Conference Proceedings
28. 304g. Identification of Important Signaling Proteins and Stimulants for the Production of Cytokines in Raw 264.7 Macrophages
Sylvain Pradervand ; Mano R. Maurya ; Shankar Subramaniam
Pub. info.: 2005 annual meeting & fall showcase : '05 AIChE, Oct 30 - Nov 4 : conference proceedings, Cincinnati Convention Center, Cincinnati, OH : non-topical presentation records : 15. Food, Pharmaceutical & Bioengineering Division.  2005.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-221(2)
29.

Conference Proceedings
Conference Proceedings
29. (181o) The Study of Heat Transfer In Gas-Solid Flow Using Particle-Resolved DNS of Steady Flow Past Fixed Particle Assemblies
Bo Sun ; Sudheer Tenneti ; Shankar Subramaniam
Pub. info.: 2011 AIChE annual meeting, October 16-21, Minneapolis Convention Center, Minneapolis, MN : conference proceedings : Non-topical conferences.  2011.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-267
30.

Conference Proceedings
Conference Proceedings
30. (25c) Quantification of Gas-Phase Velocity Fluctuations In Statistically Homogeneous Gas-Solid Flow Using Particle-Resolved Direct Numerical Simulation
Sudheer Tenneti ; Rahul Garg ; Shankar Subramaniam
Pub. info.: 2011 AIChE annual meeting, October 16-21, Minneapolis Convention Center, Minneapolis, MN : conference proceedings : Non-topical conferences.  2011.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-267
31.

Conference Proceedings
Conference Proceedings
31. Using Brownian Dynamics to Model Nanoparticle Aggregation under Shear
Sergiy Markutsya ; Shankar Subramaniam ; Rodney O. Fox ; R. Dennis Vigil
Pub. info.: 2006 AIChE annual meeting, November 12-17, 2006, San Francisco, California, San Francisco Hilton : conference proceedings. Non-topical conferences.  2006.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-235
32.

Conference Proceedings
Conference Proceedings
32. (455g) A Fully Coupled Third-Order Quadrature-Based Moment Method for the Simulation of Gas-Particle Flows
Alberto Passalacqua ; Rahul Garg ; Shankar Subramaniam ; Rodney O. Fox
Pub. info.: Conference proceedings : 2009 AIChE annual meeting, Nashvikke, TN, November 8-13 : 09 AIChE annual meeting, Nashville, TN ; Non-topical conferences.  pp.157405-,  2009.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-262
33.

Conference Proceedings
Conference Proceedings
33. (173f) Modeling of Sphingolipids Metabolism in Mouse Macrophage RAW 264.7 Cells
Shakti Gupta ; Mano R. Maurya ; Shankar Subramaniam
Pub. info.: Conference proceedings : 2009 AIChE annual meeting, Nashvikke, TN, November 8-13 : 09 AIChE annual meeting, Nashville, TN ; Non-topical conferences.  pp.166653-,  2009.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-262
34.

Conference Proceedings
Conference Proceedings
34. Feasibility of a Coupled Discrete-Time Immersed Boundary-Discrete Element Method for Numerical Simulation of Granular Multiphase Flow
Jeremy B. Lechman ; Gary S. Grest ; Madhusudan Pai Gurpura ; Shankar Subramaniam
Pub. info.: 2006 AIChE annual meeting, November 12-17, 2006, San Francisco, California, San Francisco Hilton : conference proceedings. Non-topical conferences.  2006.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-235
35.

Conference Proceedings
Conference Proceedings
35. (155d) Timescale Analysis of Cytosolic Calcium Dynamics
TaiJung Choi ; Mano R. Maurya ; Daniel M. Tartakovsky ; Shankar Subramaniam
Pub. info.: 2010 AIChE annual meeting : conference proceedings : Salt Palace Convention Center, Salt Lake City, UT, November 7-12, 2010. Non-topical conferences.  2010.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-264
36.

Conference Proceedings
Conference Proceedings
36. 383a. Model-Reduction by Simultaneous Determination of Network Topology and Parameters: Application to Modules in Biochemical Networks
Mano R. Maurya ; Scott J. Bornheimer ; Venkat Venkatasubramanian ; Shankar Subramaniam
Pub. info.: 2005 annual meeting & fall showcase : '05 AIChE, Oct 30 - Nov 4 : conference proceedings, Cincinnati Convention Center, Cincinnati, OH : topical presentation records : T4. Systems Biology.  2005.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: P-221(1)
37.

Conference Proceedings
Conference Proceedings
37. (407g) Heat Transfer in Gas-Solid Flow: Model Development Using Particle-Resolved Direct Numerical Simulation
Shankar Subramaniam ; Bo Sun ; Sudheer Tenneti ; Rodney O. Fox
Pub. info.: Particle Technology Forum 2014 : Core Programming Area at the 2014 AIChE Annual Meeting : Atlanta, Georgia, USA, 16-21 November 2014.  pp.332-332,  2014.  New York.  American Institute of Chemical Engineers
Title of ser.: AIChE Conference Proceedings
Ser. no.: 2014
38.

Conference Proceedings
Conference Proceedings
38. An Improved Multiscale Model for Dilute Turbulent Gas-Particle Flows Based on the Equilibration of Energy Concept
Ying Xu ; Shankar Subramaniam
Pub. info.: ASME 2005 Fluids Engineering Division Summer Meeting (FEDSM2005).  1A  pp.605-614,  2005.  New York.  American Society of Mechanical Engineers
Title of ser.: ASME Symposia Volumes
Ser. no.: FEDSM 2005(1A)